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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0309034, CG8...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVLPENAA EIAVANAINN INGNGNGNGR NRVLPGGLGG GGQNNMMNMR DRLFHAIYFR  60
   61 AAATYAELVP RKVQLTIEFL LLAKALLFFF TLIYVHNSFI KNPCTCLQDV KNWPREGVIR 120
  121 VEIIPHLAEK RAIWQGIKRD QEIVRSLKDS YYYGIGPQTR QNHETLKRYE SILGKLGLPV 180
  181 RPTFAYSNES LYYYFDAINI LDTYDHPNAI QLKNEEDDEE QYIVEYSLEY GHLRLSSSTR 240
  241 KRLRIPVLTV QLDPNTDKCF GDSLTRYLLK RLLGYDDLLM ASVRTIAEQE ENKGYLRNVI 300
  301 TGEHYRFVSM WWAAWSSYPA AFCVMLLFTF SVSMLLRYSH HQIFVFIVDL LQMLEYNVSA 360
  361 RFPIAPLLTV ILALVGMEAI MSEFFNDTTT AFYIILIVWI ADQYDAICCH TSITKRHWLR 420
  421 FFYLYHFAFY AYHYRFSGQY RTLALLSSYL FTQHSMVFFF HRYELPAIMA QHQVFIITRN 480
  481 QGAAAAAAAA AAGAGGAEAA GGGAGAGAAA GGQQGDGGAG GGGIGAGQQA SMQRARLIVT 540
  541 RLFSQLAAQR HQQEPRPPGP TAAVGVALAN LRRLPVVGQL LQGREQFATV RRVFLGHGGN 600
  601 ARLMQVRLQR INVADIPGLR NQVAAAMAAA GAAQRGQSAA TDEPTIGDVA TTDVAAAADA 660
  661 AATPAANDAA DVETNQGRKQ PTTSSINDAV ATGAEGAQDK PGQEKVEVVE NSGQENLQHG 720
  721 DGDGQIAGMS KTLENLNFVA ADIINMSDET TVASSPPTNG TQQPDQTLIH THVHVHQTQP 780
  781 KARQLENNLP ELLKAEGGAS AATASGEKQS CPLQAPSIMN DQQQQQQQQQ RQKNKPDEPA 840
  841 TATVATSAVA TSKQSSGPGA TEVGVVGAAG GAEATARPMM DDRQTVDFIE GDSPTSAANC 900
  901 QLNAGANHKA QEQQLMKTSQ HTSNQVTTAA ATGAAAGTPA TVTQATGATA AMGTAETSAE 960
  961 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle