YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG8315-PA
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQLVQLNNQ AGGRDKIARL IQYASRAMWD SLESANSNPA LVDNFKTVEY ILSTFRKLLR  60
   61 FGKCVDVFYG ALKTIHHPDL NIRVTLTLSK LSQSLFLFAD HFLWLARTGL TAVNAKRWSN 120
  121 IANKYWLFSI IMNLCRDFYE ILRVLDLHRS GSKSGISRCR IPASINSPED FKRLALQSYV 180
  181 LMQGHKDIVV DTVKNACDFF IPLTALGYTS LTPRTIGLLG AISSLAGLWA LLEPRAKLTP 240
  241 A

Type	Start	End	Confidence
Non-Cytoplasmic	1	210	0.66
Transmembrane Helix	211	232	0.66
Cytoplasmic	233	241	0.45