YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Sec61beta-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.38
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAPASSTSV GSGSRSPSKL SAPRSAGSGG GSTLKQRKTT TSTTAARSRA PGGAGTGGMW  60
   61 RFYTDDSPGI KVGPVPVLVM SLLFIASVFM LHIWGKYNRS

Type	Start	End	Confidence
Cytoplasmic	1	44	0.72
Transmembrane Helix	45	63	0.38
Non-Cytoplasmic	64	71	0.59
Transmembrane Helix	72	95	0.88
Cytoplasmic	96	100	0.63