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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LamC-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSARRVTLNT RVSRASTSTP VGGASTSSRV GATSPTSPTR TSRQQEKEEL QHLNDRLACY  60
   61 IDRMRNLENE NSRLTQELNL AQDTVNRETS NLKAVYEKEL AAARKLLDET AKEKAKLEID 120
  121 IKRLWEENDD LKPRLDKKTK EATVAENNAR LYENRYNEVN GKYNQSLADR KKFEDQAKEL 180
  181 ALENERLRRQ LDDLRKQLEA ETLARVDLEN QNQSLREELA FKDQVHTQEL TETRSRRQIE 240
  241 ISEIDGRLSR QYEAKLQQSL QELRDQYEGQ MRINREEIEL LYDNEIQNLK AAANRAAQGS 300
  301 ALATEEVRLM RTKIDGLNAK LQNLEDTNAG LNARIRELEN LLDTERQRHN QYIASLEAEL 360
  361 QRMRDEMAHQ LQEYQGLMDI KVSLDLEIAA YDKLLCGEER RLNIESPGRP TTDSGISSNG 420
  421 SHLTASASSR SGRVTPSGRR SATPGISGSS AVKRRRTVID ESEDRTLSEY SVNAAAKGDL 480
  481 EIIEADVEGR FIKLHNKGTE EINLTGWQLT RIAGDEELAF KFSRGSKVLG GASVTIWSVD 540
  541 AGTAHDPPNN LVMKKKWPVA NSMRSVLANA DKEDVASYDR VRANVSSHTS RHRSSGTPST 600
  601 GFTLGSGAGS TGVRSLFSLL F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle