YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG18324-PA
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFGALGGCT GTYFASPFYM IKAQQHAQAV QSIAVGFQHK HTSMMDALLH IYRTNGISGF  60
   61 WRAALPSLNR TLVASSVQIG TFPKAKSLLK DKGWITHPVL LSFCAGLSSG TLVAVANSPF 120
  121 DVLTTRMYNQ PVDEKGRGLM YKGLVDCFTK IWRTEGIHGM YKGFWPIYFR SAPHTTLTFV 180
  181 FFEKLLHLRD RYVFSQRRN

Type	Start	End	Confidence
Cytoplasmic	1	93	0.86
Transmembrane Helix	94	116	0.84
Non-Cytoplasmic	117	166	0.95
Transmembrane Helix	167	188	0.64
Cytoplasmic	189	199	0.73