YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG8323-PA
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSDFVLGG LASVGATFFT NPIEVIKTRI QLQGELAARG TYVEPYKGIV NAFITVAKND  60
   61 GITGLQKGLA PALYFQFIIN SFRLSIYSEA MERRWMHNRK GEVSYGMGLL WGAIGGVVGC 120
  121 YFSSPFFLIK TQLQSQAAKQ IAVGYQHAHT SMTDALRQIY SRNGVRGLWR GSVAALPRAA 180
  181 LGSGAQIATF GKTKALLVQY DLVTQPTLNS FSAGLIAGSI MSVAITPPDV ITTRLYNQGV 240
  241 DAEGRGLLYR GWLDCFVKIL RSEGVYGMYK GFWANYLRIA PHSTLVLLFF DELVAVRTKY 300
  301 SNQ

Type	Start	End	Confidence
Cytoplasmic	1	102	0.72
Transmembrane Helix	103	125	0.89
Non-Cytoplasmic	126	303	0.84