YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Aats-phe-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLTLRVQGA RHWLKSTRCL ASSAAPAKSP SSPPQLEVSG STYATDGWTN VTPKILSYVG  60
   61 ANKHLQTDHP LSIIRQRIVN YFYGAYRNQR GNPLFSVYDQ MNPVVTVQQN FDNLLIPADH 120
  121 VSRQKSDCYY INQQHLLRAH TTAHQVELIS GGLDNFLVVG EVYRRDEIDS THYPVFHQAD 180
  181 AVRLVTKDKL FERNPGLELF EETWSGTLAD PKLILPSSKF MDQTKQPCHT LEAVKLMEHE 240
  241 MKHVLVGLTK DLFGPRIKYR WVDTYFPFTQ PSWELEIYFK DNWLEVLGCG IMRHEILQRS 300
  301 GVHQSIGYAF GVGLERLAMV LFDIPDIRLF WSNDSGFLSQ FSEKDLHNLP KYKPISHYPQ 360
  361 CTNDLSFWLP QDIEVDAGFS PNDFYDLVRS VAGDMVEQIS LVDKFKHPKT GKSSVCFRIV 420
  421 YRHMERTLTQ AEVNEIHKQI ASASVDSFNV QIR

Type	Start	End	Confidence
Signal Peptide	1	31	0.54
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	453	0.99