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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Cpr50Ca-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMAICGGGI PTLMLLIMTA IISLVQAADT WQRLPSLETF SSYEDMQRYF DQRNFRSMRQ  60
   61 IDNPTGDTYL AAFNQYNEQV ENQSPRRVAQ THSRIKREQR QLPTAPRMLR FELADAVEPS 120
  121 PELKQILRQY HARALKENPT AASPASTSQA PTPAVSPTKA TKAKSRKPRR QRRSVVGAQQ 180
  181 PADFKVQMIP FEETDAREPD PITAQLIKKA RSLDLQSQAT RSTDFRHTKP QVARKQPIQV 240
  241 RIRKTKRSKR SAPQMIKFEL ADAKAMPQRS GKQMVSEAVP TLLTMETQRN NTQAPQLTTT 300
  301 TPRVEDNDIL TGEATAETKR MYVYKEAPVN SGHVKTKKSL STLPHEVQKV ISQLMKDGLG 360
  361 GKAYVKYLPA QKSDYEHYKA KSLSYGGKPL VNYVKYINKP AEPAASPSPV QVHIQPVPVV 420
  421 EQLRYVYKPH YAAVAPTIAQ PIVVQEAPAP TAAVEEVHHT YTAELAPPPT QSVEVVVPQF 480
  481 RPSKPDPLLA EAPAIYGKPQ EAYNSYELQP EASPLIKIEY HAQPDGINEH YKQLPEFQQL 540
  541 STLIGKSPDD QIHGLTYLLA KEMQAKLQRQ GKQLVDRPQD STAPILFHPG QGASPAPTLK 600
  601 TLLEHGSLGV QPGRLIGMAK TKQYVPIIEP GNNDVKELPA VPSSAASKLP TPSSYIDYTH 660
  661 GHGLSNGYEG VTNAEEPVTT VEHVVHHPTV ATQLHHQVLL PKQQHHHHQQ QHHGLVATVL 720
  721 PAELDSDKGV NGLHFVNSDE DKSLQQYASK YEFGYRIRDF HTGNDFGHKQ NRDLHGVTRG 780
  781 QYHILLPDGR IQNVIYHADD TGFHADVSFE GATKH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle