YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG30062-PA
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGVGEPLRD WSPLGMVRSS WSKVRVLPLL WFLFHGIPLL AIRLQPCELA GQLYILDVPK  60
   61 SELPLWLCIA EFESRFNTHV VGQANADGSR DYGLFQISDR YWCAPPNRTE YYAFNDCNVN 120
  121 CTHLLSDDIT MAVQCARLIQ KQQGWTAWSV YPEFCNGTLD AIDVCFQPGN ATESMTSDEL 180
  181 AEVKDC

Type	Start	End	Confidence
Cytoplasmic	1	20	0.79
Transmembrane Helix	21	42	0.76
Non-Cytoplasmic	43	186	0.94