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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG42321-PE, CG42...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSIFRFRLP FRRSELPETG LLNTYDEDFT SSAGYDADDG ERRIINLNGP QPTKYGNNRI  60
   61 TTAKYSFISF LPAFLFEQFR RYSNCFFLLI AILQQIPEVS PTGRYTTLVP LMFILSVSAI 120
  121 KEIIEDIKRH RADNEINHRS IERLDSGSWC TVRWSELTVG DIIKVGINTF FPADLILLSS 180
  181 SEPQAMCFIE TANLDGETNL KIRQALPATA ELLETKDLQR LEGRIECELP NRHLYEFNGV 240
  241 LRETGKPPAA LGNDQVLQRG AILRNTAWVF GIVVYSGQET KLMKNSTSAP LKRSTVDKLT 300
  301 NTQILMLFMI LISLCIISGL CNLFWTREHS ETDWYLGLTD FKTKSLGYNL LTFFILYNNL 360
  361 IPISLQVTLE LVRFLQAIFI NYDIEMYHEE SNTPAMARTS NLNEELGMVK YIFSDKTGTL 420
  421 TQNVMEFKKC SIAGYVYTAE RTPEESQLVQ NILGRHETSA VIEEFLELLS VCHTVIPERK 480
  481 ENGNMIYHAA SPDERALVEG AQKFGYIFDT RTPKYVEINA LGVRKRYEVL NVLEFTSSRK 540
  541 RMSLIVRTPE NKIKLFCKGA DTVIYERLAP QGQAFREQTL RHLEEFASDG LRTLCLAVAD 600
  601 IRPDVYQEWS QTFDKASVAL QNRESKLEDA ANLIENNLRL LGATAIEDRL QDGVPETIAS 660
  661 LLDAGIYIWV LTGDKQETAI NIGYSCRLIS HSMDIIILNE ESLDATREVI HRHYGEFKSS 720
  721 SAKDANVALV IDGTTLKYAL SCDLRNDFQD LCILCRVVIC CRVSPMQKAE VVEMVTQSTN 780
  781 AVTLAIGDGA NDVAMIQKAN VGIGISGVEG LQAACASDYS IAQFRYLQRL LLVHGAWNYA 840
  841 RISKLILYSF YKNVCLYVIE LWFAVYSGWS GQILFERWTI GLYNVLFTAM PPFAMGLFEK 900
  901 FCTAETMIRY PMLYKTSQNA KLFNVKVFWI WIFNALLHSV FLFWLPLAAY TKEVIWSDGK 960
  961 TSDYLLMGNL VYTYVIVTVC LKAGLITNSW TWLTHLAIWG SIVLWFGFLL IYSHVWPMFK1020
 1021 FASNFRGMDI QLLSTPVFYF CLMLVPITTL LIDVICKLVH NTVFKTLTEA VRETEIRRSD1080
 1081 ISEVMNEPRS SFTETARLLR NVFTRRANTR VETDLELSHG YAFSQEEGGA VPQSIIIRAY1140
 1141 DTNLPKPEGN 

YRC Informatics Platform - Version 3.0
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