YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG4670-PA, FBpp0...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATHLVILA VALLVDIASA GVPLPRYEAL LKQQSPPSDP TLGLYDDGDK VIRLSVDNFN  60
   61 ATVLDQNRGA LVEFYNTYCG HCRRFAPTYK SVAEHLLPWS EVLIVAAIDC AAEENNGICR 120
  121 NYEVMGYPTL RYLGPGFQPG PQHYGQSLHT QDKNEIREIL AGMVAAENLT SSHNNSYWPN 180
  181 FHYLTENDSA SSLFEGLSSA TEYVAVVHEP ENTTLGVEVA LFMTQWPAVR VRRVIDPAVA 240
  241 AKFKIDPTNL PLSLVDRKGE ITAYAPESTN GESYAKKLWD VLGKKNITPR PVKVHQPSAT 300
  301 PASKIKGQNE LIDEVHRNKH FVYQADLEQA IRTVLHNEVS KVGEISGEKL LALQRFLAVL 360
  361 QRYNPLGANG HQLVSKLKDY VVQFNDQRLT GSQFEEELKR LEAHLSPVYS SNHFVGCVGS 420
  421 SPRLRGFSCS LWTLFHFMTV QAANNEETQD PLEVLQAMHG YIKNFFGCTE CSEHFQAMAS 480
  481 RRKIWSVPNK EEAVLWLWAA HNEVNQRLAG DATEDPEFPK KQFPAPESCN ECYRTPVSKS 540
  541 ENLEIEWNKD AVLGFLKNIH NPQFVSRYGV QREELLHPTA DKMRQKRQIS SVFTDMDMRM 600
  601 GMLLYAFCIV MMVLAFKLFA FKGYRKKPYG HDLLGKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle