YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0305105, Nmd...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYFADPNQQ YNYGGGNPPQ GGYGGYPPQG GYPPQGPPQG YPPYAQGGAQ PYPQPYGQGP  60
   61 PPGGYAPQPG FIQPPPSAGG YGAYDDPESQ PKNFSFDDQS IRRGFIRKVY LILMGQLIVT 120
  121 FGAVALFVYH EGTKTFARNN MWLFWVALGV MLVTMLSMAC CESVRRQTPT NFIFLGLFTA 180
  181 AQSFLMGVSA TKYAPKEVLM AVGITAAVCL ALTIFALQTK YDFTMMGGIL IACMVVFLIF 240
  241 GIVAIFVKGK IITLVYASIG ALLFSVYLIY DTQLMMGGEH KYSISPEEYI FAALNLYLDI 300
  301 INIFMYILTI IGASRD

Type	Start	End	Confidence
Cytoplasmic	1	108	0.95
Transmembrane Helix	109	130	0.93
Non-Cytoplasmic	131	140	0.87
Transmembrane Helix	141	161	0.94
Cytoplasmic	162	170	0.80
Transmembrane Helix	171	191	0.86
Non-Cytoplasmic	192	197	0.75
Transmembrane Helix	198	217	0.94
Cytoplasmic	218	224	0.71
Transmembrane Helix	225	246	0.93
Non-Cytoplasmic	247	251	0.71
Transmembrane Helix	252	270	0.95
Cytoplasmic	271	290	0.75
Transmembrane Helix	291	313	0.86
Non-Cytoplasmic	314	316	0.75