YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Taz-PC
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYVQAPEAR PVPDERYPGS QQDRKDIATQ TVRSSKPKDL RPPSPPTPSQ TLNSSSLPPP  60
   61 MSDQDADPSL DVPTGVAMPY NIDWIFPRLR NPSKFWYVVS QFVVSAVGIF SKVVLMFLNK 120
  121 PRVYNRERLI QLITKRPKGI PLVTVSNHYS CFDDPGLWGC LPLGIVCNTY KIRWSMAAHD 180
  181 ICFTNKLHSL FFMFGKCIPV VRGIGVYQDA INLCIEKAAL GHWIHVFPEG KVNMDKEELR 240
  241 LKWGVGRIIY ESPKIPIILP MWHEGMDDLL PNVEPYVIQR GKQVTLNVGQ PLDLNDFILD 300
  301 LKKRQVPEPT ARKLITDKIQ EAFRDLRAET EKLHRERN

Type	Start	End	Confidence
Cytoplasmic	1	94	0.67
Transmembrane Helix	95	116	0.73
Non-Cytoplasmic	117	338	0.84