YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG8776-PC
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYRDGFAWS ESPKQQFNLH PILMIAGFVT LSGFSILIYR LCRCVKQIYV KLIHMFFHAV  60
   61 AIPCIALGFI SVFASHDALH KVNFYSLHSW LGFVTMGMFV LQFVIGFFSF LVMLCCENKT 120
  121 YSCRSAMVPI HASLGLANFW LAIATSVTGL IEKERETVNE AGVSSENKLV EHYITSAIGV 180
  181 TLIFIGIIVT FAVRRSNAPA SAKVYVTERI

Type	Start	End	Confidence
Non-Cytoplasmic	1	18	0.96
Transmembrane Helix	19	41	0.92
Cytoplasmic	42	53	0.84
Transmembrane Helix	54	74	0.93
Non-Cytoplasmic	75	90	0.86
Transmembrane Helix	91	114	0.89
Cytoplasmic	115	126	0.78
Transmembrane Helix	127	148	0.83
Non-Cytoplasmic	149	171	0.91
Transmembrane Helix	172	193	0.94
Cytoplasmic	194	210	0.97