YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG8818-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMLTRLTSS GTTTVAGAPG SPKGLQRFQN YISAFLWPGT QRQRRKSTHL DPMDCFTNDL  60
   61 VTRKTQKWEE LRDSLIKRPS SGNLEADANC NVGTQRKAGS TSFSQNVGLM SKGMMSDLKA 120
  121 LRSPQLGLDI RSLSQAQLDN LLMATLEIKN KLDFLYLIRQ CIRCNLLPSN EVFVSCLKYL 180
  181 SAQRKLQQLE ALAETCRQLE HPFSQTYADL APFRAIALWN NGNADVALMT LHRGYGVSMT 240
  241 SEEGRRMARS AFRTISEETL AQKSEAVLVS LLEVARAIHR EHKDIFVVAC VWKQCFASDW 300
  301 FCDQKSASEL FEHYKELQEL VERRASSLCS SFLARNNVDA VHRLIEAFLQ HQQRLACSSC 360
  361 LSLLFNYQYM RKDLRACAEI VKSCSELEMP LNELQNEQFL SLFLDQSDPV DSSGMASKYK 420
  421 APKSFQYKF

Type	Start	End	Confidence
Signal Peptide	1	17	0.58
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	429	0.99