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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG8298-PB
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYDPSEIWK NTQECIETAY KNLVILEINP RDIIAIGIVN QRGTSVLWNL ETGQPLHNAI  60
   61 GWSDCRSTPI LKTLLHNVRH NVDYVRYRSG LPLSSCFSAL KIRWLMDHVP AVATAIEENK 120
  121 CLFGTLDSWL LWNLTGGVEM GVHSTDITNA HYTSLMNVST EQWDPKLCQF FRLPLNILPR 180
  181 IRSNSEIFGY VLEGPLHGTP IAAMMGEQPA SLLGQLCVKA GQNVCTLDDS CFVLLNTGRE 240
  241 KLDSANGLIT GIAHKLGEKA ATNYTLEGAI SNAGSTVTWL RDKLQINTEI NSNDNVVESL 300
  301 NTFIGENSMI SSSCSSSMLN AECGLAAKRS EITFVPAFHG MYAPYWRHDA RGIILGLTSQ 360
  361 TTAENITQAA YEATGFQIFE VLQAFKRDTP NWDRSSMQPV LTFGGDYAEN LHLVQFIADI 420
  421 IGYMLERPQT TSPAGLGVMI TAGVTMKVVS LEHAVKMYTP PTDVFSPTTT KNRRELLYKR 480
  481 WAYAVKKCLH WNNYETYEAD IELFAQRELD PNLPVRRSVP GSIFLTTSFA MIILANYLKS 540
  541 NPLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle