YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG33145-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRRWNPEKI EEQSSLLAAE YSSSSGAAAS GSEDETVTTS GALRSKAKLR KRQLRNRMPL  60
   61 PRMLRRLGCY TLSAFLICGL LLVYLPLVYL DVHKRSAGLP DWTSETSRSI ADYLDIGLSS 120
  121 GVIVPKDFCR NKTFLVIAVC TGVDNFIQRH TIRETWGNTT EFNYPAFGKL HGHLKGHYLP 180
  181 PLPDRLKMYG DYLSGEGQSL TASVRIVFIV GRQKDEAMLG NETLNRIHIE SEKYNDIIQE 240
  241 NFVDSYNNLT LKSVMALKHI SRSCFNTAVY FLKCDDDTFI TTTGPPI

Type	Start	End	Confidence
Cytoplasmic	1	66	0.97
Transmembrane Helix	67	88	0.94
Non-Cytoplasmic	89	287	0.94