YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG30037-PA
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHIRLVDELK RLYRIVARIW LFIRRYKAII ILAVFLAYRI FNFKPDPSKR TASLAGWSRD  60
   61 APRSVADYLD PTKDTALIVP RHFCRSKALL TIAVCSYVHH FERRRAIRKL WGNFTDFNYS 120
  121 VFVKLHGHLK GRYQDVLPER LKLYSEYLSG EGDSLRASIR LVFIVGRRNL ASLLENEAVA 180
  181 IEAQKYNDVI QENFIDTYNN LTIKAVMALK HITQSCLNTT AFYFKCDDDT FVNVPNILHF 240
  241 LLGGTIPVNV VTAGFHYGNT YEVTSPRKRL TARREMMYGR QHCNVPPATN KLNKWYMPSY 300
  301 MFRGGVYPRY LCGSGYLLSI DVVPRLYKAS LGTRIVHLED MFVTGLCAEK AGIKRTNHPL 360
  361 FRSSYPYEGD EQCALKGSFT VHRAKDNVMW EAWYRVTNFS SKCPPPQKDF HLRLPKMQRC 420
  421

Type	Start	End	Confidence
Cytoplasmic	1	20	0.94
Transmembrane Helix	21	41	0.91
Non-Cytoplasmic	42	420	0.96