YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Tango3-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYPLRVLVT NDPPHCFVDK DELPGSPNRY KGSIVTMLKI FADQLNATFQ ANPFREFRRY  60
   61 STADCVQMVS DDEIDACGSI FIRTYTYATS QPVRLNRVVI MAPFGNPIEK FYYFFRPFDL 120
  121 YVWIGTGIIV VYIAVMGSLL HRWHFKEWNV GQYLLLAVQT LLNRELSLPQ SSSGSKFMLL 180
  181 LLLFAIGFIL SNLYVALLSM MLTTKLYQRP IENLADLKAA NVNILLQTHN IRPNSVYGSS 240
  241 EELRERFLLV EESQHLEKRN GLDPSYAYVD SEDRMDFYLY QQKFLRRRRM KKLSNPVGYT 300
  301 WAVQVIKQNW VLEKHYNDHV QRFFETGLQN KLVDDVHELA VKAGFLHFFP TQTQTIEPLR 360
  361 LEDIVMAAMV LGGGHALAVI CFLVELFA

Type	Start	End	Confidence
Cytoplasmic	1	119	0.95
Transmembrane Helix	120	141	0.93
Non-Cytoplasmic	142	176	0.87
Transmembrane Helix	177	198	0.92
Cytoplasmic	199	363	0.90
Transmembrane Helix	364	386	0.86
Non-Cytoplasmic	387	388	0.72