YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Buffy-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGTSYPTNN DNFSNGFPMA TTQSERLLQA QNRRKFSFPA TLHSASLLEV GGGPKETTRR  60
   61 RLSNVSDAVT RKLSYTIGWK AAQIPAQDII SQGRCLCGHY IKRRLRRSGL FNKKLGLQRI 120
  121 RSILGSTSMG IVRDVFPAVQ VLGDELERMH PRIYNGVARQ ICRNPGGEFH TPDAVSLLLG 180
  181 AVGRELFRVE ITWSKVISLF AIAGGLSVDC VRQGHPEYLP KLMESVSEVI EDELVPWINE 240
  241 NGGWSGINTH VLPTTNSLNP LEWTTLVIGV VFGLILVFMI LRFIFNLIVP KIYQRFTNS

Type	Start	End	Confidence
Non-Cytoplasmic	1	262	0.66
Transmembrane Helix	263	285	0.92
Cytoplasmic	286	299	0.89