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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG30035-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGRDNRGAG GGGGGHQPLS NAMGKLKEKL TRVGDELGYH RVESNLSTSN TATSLDTILP  60
   61 EDPFLFPQVS PQRHPQNTVR TQRLLEDEPP LSFRPLLEDD DINEPPTQQQ QRTPLRASGS 120
  121 LELTPLPPPP TSLEIREHRD RQQRGAQGDE LQRSKQSLKG SRVSFERRDT GNSNTNSNKA 180
  181 AESSDEDSFE EKRTGFQQQK ATSVDHKGIL KDLKHILAND NRRQFQAKKH VSLDVKGTRF 240
  241 LQDLLKESSS EEEFHKTRRE FQGRKHQSLD PRVTFKLDKV LQGSSTDSDE EGEDAEHKRL 300
  301 IHRPKDITKP VIIDLKDLES ESDEDFLTSR QHFQQQRSIS TDSRKSRRLY EMDEMDNKRG 360
  361 ENIRHAVPFV RQITEDGKPK LEVYRPTTNP IYIWTQVLAA LSVSLGSLVV GFVSAYTSPA 420
  421 LVSMTDRNIT SFEVTQDAGS WVGGIMPLAG LAGGIAGGPL IEYLGRRNTI LATAVPFIVS 480
  481 SLLIACAVNV AMVLCGRFLA GFCVGIASLS LPVYLGETVQ PEVRGTLGLL PTAFGNIGIL 540
  541 LCFVAGSFMN WSMLAFLGAA LPVPFLILMF LIPETPRWFV GRGLEERARK ALKWLRGKEA 600
  601 DVEPELKGLM RSQADADRQA SRNTMLELLK LNNLKPLSIS LGLMFFQQFS GINAVIFYTV 660
  661 QIFKDAGSTI DGNLCTIIVG IVNFLATFIG IVLIDRAGRK ILLYVSDIAM VLTLFVLGGF 720
  721 FYCKTYGPDV SHLGWLPLTC FVIYILGFSL GFGPIPWLMM GEILPAKIRG SAASVATAFN 780
  781 WFCTFVVTKT FQDLTVAMGA HGAFWLFGAI CFVGLFFVII YVPETQGKTL EDIERKMMGR 840
  841 VRRMSSVANI KPLSFNM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle