YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Drip-PB, Drip-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEKTEMSKF VGVADITENK KIWRMLLGEL VGTFFLIFVG VGSTTSGSVP QIAFTFGLTV  60
   61 ATIAQGLGHL SGCHINPAVT LGFLIVGEIS ILKAAFYIIV QCVGAIAGAA VIKVALDGVA 120
  121 GGDLGVSSFD PSLNCAQAVL IEALITFILV FVVKAVSDPG RQDIKGSAPL AVGLAIAAGH 180
  181 LCAIKLSGAS MNPARSFGPA VVQGVWTYHW VYWVGPIAGG LLAGIIYRLI FKVRKGDDET 240
  241 DSYDF

Type	Start	End	Confidence
Cytoplasmic	1	25	0.93
Transmembrane Helix	26	46	0.85
Non-Cytoplasmic	47	62	0.58
Transmembrane Helix	63	86	0.75
Cytoplasmic	87	93	0.80
Transmembrane Helix	94	116	0.89
Non-Cytoplasmic	117	134	0.92
Transmembrane Helix	135	156	0.91
Cytoplasmic	157	166	0.88
Transmembrane Helix	167	189	0.89
Non-Cytoplasmic	190	208	0.93
Transmembrane Helix	209	231	0.89
Cytoplasmic	232	245	0.99