YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0303452, CG1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMQETGNQMG QTHMHQRVPF NDTVLKDYHL TSTDIEKFVK LWQEYQMKNM TPQVDECQGY  60
   61 CQGEIYNWLR AYNSIHGYVS LMICIFGTIA NILNIMVLTR KEMAKTPINN ILKWLAVADM 120
  121 FVMLEYIPYT SYQYIYMGPG EKDLSYTWAV CLLVHMHFTQ ILHTISIGLT VTLAVWRYVA 180
  181 IRHPNGGCAN FLLAHSREAI LLPFILSPIL CLPTYFVFQV RETYDVDKVN SEAMYHVYFD 240
  241 KDSVLYRFNF WIHSVLIKLL PCGILIVISA VLMHVLCEAS RRRLKLRDYN NPAKYAIQLN 300
  301 LNETKSKKPP RCDRRNDRTT LLLVAVLVLF LITEFPQGLL GLLSGVMEKC FFAHCYPPFG 360
  361 ELMDLLALIN AAVGFVLYGL MSKQFRTTFR SLFMKRHFGS TEMTRLTRVT TTCV

Type	Start	End	Confidence
Non-Cytoplasmic	1	74	0.96
Transmembrane Helix	75	98	0.90
Cytoplasmic	99	110	0.88
Transmembrane Helix	111	129	0.92
Non-Cytoplasmic	130	158	0.89
Transmembrane Helix	159	180	0.91
Cytoplasmic	181	198	0.92
Transmembrane Helix	199	218	0.93
Non-Cytoplasmic	219	254	0.96
Transmembrane Helix	255	277	0.94
Cytoplasmic	278	318	0.98
Transmembrane Helix	319	340	0.89
Non-Cytoplasmic	341	361	0.90
Transmembrane Helix	362	382	0.89
Cytoplasmic	383	414	0.95