YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15292047
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGSVRFCEK CKIIKPDRAH HCSVCSCCVL KMDHHCPWVN NCVNFYNYKY FVLFLGYALV  60
   61 YCLYVAFTSL HDFVEFWKVG AGQLNASGMG RFHILFLFFI AIMFAISLVS LFGYHIYLVL 120
  121 VNRTTLESFR APIFRVGGPD KNGYNLGRYA NFCEVFGDDW QYWFLPVFSS RGDGYSYPTS 180
  181 SDQSRVSTSS PTQRYDAMGD TTTSRLDGNP TDKLIGASPL DTTNHHHNQS PHQVRSTSVL 240
  241 PTQLLQIQPP STCRDELNER QQKLANGQSL DCSTPAAMSS PDERGVNGAA VYIEMIGDHP 300
  301 LTSADPAKGF PRPPNGDLPV

Type	Start	End	Confidence
Cytoplasmic	1	49	0.72
Transmembrane Helix	50	71	0.85
Non-Cytoplasmic	72	93	0.63
Transmembrane Helix	94	118	0.90
Cytoplasmic	119	320	0.68