YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	eve-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHGYRTYNME SHHAHHDASP VDQKPLVVDL LATQYGKPQT PPPSPNECLS SPDNSLNGSR  60
   61 GSEIPADPSV RRYRTAFTRD QLGRLEKEFY KENYVSRPRR CELAAQLNLP ESTIKVWFQN 120
  121 RRMKDKRQRI AVAWPYAAVY SDPAFAASIL QAAANSVGMP YPPYAPAAAA AAAAAAAVAT 180
  181 NPMMATGMPP MGMPQMPTMQ MPGHSGHAGH PSPYGQYRYT PYHIPARPAP PHPAGPHMHH 240
  241 PHMMGSSATG SSYSAGAAGL LGALPSATCY TGLGVGVPKT QTPPLDLQSS SSPHSSTLSL 300
  301 SPVGSDHAKV FDRSPVAQSA PSVPAPAPLT TTSPLPAPGL LMPSAKRPAS DMSPPPTTTV 360
  361 IAEPKPKLFK PYKTEA

Type	Start	End	Confidence
Cytoplasmic	1	130	0.98
Transmembrane Helix	131	154	0.87
Non-Cytoplasmic	155	164	0.86
Transmembrane Helix	165	186	0.87
Cytoplasmic	187	376	0.63