YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220949222
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPILYSVISR GTTVLAKFAE CVGNFAEVTE HIIGRIGVHN HKMTYTHGDY LIHYTCENKL  60
   61 VYMCITDNEF ERSRAFLFLA DIKQKFIQTY GLQVATAIAY SMNTEFSKIL AQQMVYFSQS 120
  121 REVDTISRVH GQIDELKDIM VKNIDSLRDR GEKLELLVNK TENLSNNSVA FRKASRNLAR 180
  181 QMFWKNIRVY VVVGLVITFI VYVIVSMACG GLAWQSCV

Type	Start	End	Confidence
Cytoplasmic	1	188	0.96
Transmembrane Helix	189	214	0.85
Non-Cytoplasmic	215	218	0.93