YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220957080, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMAKDKGLAV AGTAAPLPAA LDHEWSAEEE LQLFHAMEGL RPVGINKHFY MSCIVQRLSK  60
   61 SLNREMPSEL IWRHLGTMYK LKELDDLESL PFPNEEREFS LPEQDYGTLQ TKKTVEVHAN 120
  121 EEAAEAQSAP PTAETNGKAP PATKTPVPTN STKDGDKKPV AKPQEQLPKR PAKRTRGSMS 180
  181 NESISPSTTP PPVQSNKRRR I

Type	Start	End	Confidence
Signal Peptide	1	21	0.86
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	201	0.99