YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220948282
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFVFLACL AVASAGVVPS ESARAVPVKD MPRAGKIEGR ITNGYPAYEG KIPYIVGLSF  60
   61 NDGGYWCGGS IIDHTWVLTA AHCTNSANHV LIYFGASFRH EAQYTHWVSR SDMIQHPDWN 120
  121 DFLNNDIALI RIPHVDFWSL VNKVELPSYN DRYNSYSGWW AVASGWGLTD NNSGMSNYLN 180
  181 CVDVQIIDNN DCRNYYGSNY ITDNTICINT DGGKSSCSGD SGGPLVLHDN NRIVGIVSFG 240
  241 SGEGCTAGRP AGFTRVTGYL DWIRDHTGIV Y

Type	Start	End	Confidence
Signal Peptide	1	25	0.93
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	271	0.99