YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG2183-PA
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.20
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSNLCKYGP PPDSDSDSSY DGFYFSDKVK RSKPAPYVDP EQKLYDAVVA GDLKTMQEEM  60
   61 RKLVLQVDQP VKGGLNLLML ACREGHYKIV EWLLERAGAN VNRQLDSLMP LMMACNTTHK 120
  121 DPCLAERIVG LLLRHGAVIN VSEKYGMTPF MFACQNGFAG VVRLLIKDAS FDAVDNQGCT 180
  181 AIFHAIEKNH VEVVKLLVEA GANATIANNK GYTPTQVAEC HGYYDLLEIL PRPASTYLVP 240
  241 THFLGYNTLR DHIPRIFLKS DCPEYFQELN GILEAINIGN MVQYFAIARI SLADFLVMDE 300
  301 QSLREIGIEY PIFRHKILTG ILDFHLHHWS NSSIARVKKD EMNNFYEILL ITASHLQHLV 360
  361 IIQASLRFIL KNQEHNKMGQ PSEMQVAAMK SNLQGYRDVL NQITKTVKYL GSFSPSQNPL 420
  421 FIDFNEILAE RKRKKVRSYF KYTTIILGIS VFICLKCKWF S

Type	Start	End	Confidence
Non-Cytoplasmic	1	438	0.63
Transmembrane Helix	439	460	0.61
Cytoplasmic	461	461	0.20