YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG8708-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSASLLSRS LLTEAPRSKN RSVFTLIAGL VVGYCLAQIF SSIAPHESLY PYLSRRFSDS  60
   61 QVATGGQLAP EQSGLKHDHR NDNVSVAEQL KKEVRILCWV MTNPTNHKKK ARHVKRTWGK 120
  121 RCNILLFMSS GADEELPTVK LDVGEGRENL WAKVKEAFKY VYHHHYNDAD FFYKADDDTY 180
  181 AVIENMRYML YPYNPETPVH FGFKFKPFVK QGYMSGGAGY ILSREALRRF VVEGIPNPKM 240
  241 CLPGTVVNED IEIGRCMENL NVTAGDSRDE IGRGRMFPFI PEHHLIPAKA DKNFWYWNYL 300
  301 YYKTDDVSFA

Type	Start	End	Confidence
Signal Peptide	1	37	0.91
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	310	0.99