YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG17985-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRNARQQQH NQEEIGPDDV EDIFARPAYD DDEFEDLLPL ARRPNGHARL GRYENTLEVK  60
   61 VQEGDTLQAL ALRFHSSVAD IKRLNKIDRE NEIHAHRVIR IPVTVHNVLL GNGGLEALPA 120
  121 VHRSGNNSPR HNIEREPAPE RNPLEDARQM LDERLLVAAV NASGAVDHEK PSTSRAAGQF 180
  181 YEGAQGAPND EANMEQPYEE NAALLNHMVD RHAPLVRPIP GPSLSAIDWS GSDCDLSWIC 240
  241 LLIFILALCV VIPLVYVIYL AEHPHHNHSA Q

Type	Start	End	Confidence
Cytoplasmic	1	237	0.79
Transmembrane Helix	238	260	0.93
Non-Cytoplasmic	261	271	0.76