YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	lbm-PA, FBpp0307822
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCATTSVKI ASIVLNAVLG FLAAGAIGWI AYNADTETEE FVIAAYIACS LILVFALLGI  60
   61 FAAIRESVVL TATSAVFLLI LAILQIVSTC LFLHEFDVKS GRDMVEVAWQ ANNMDSLQQK 120
  121 HECCGQSSAQ DYIHLSLLIP PSCYADLQQT PDHLYLDGCI EKVQSFYESD KLRFIIVSWV 180
  181 LVAFELICFA LAVFLAISFK NKQRRMEF

Type	Start	End	Confidence
Cytoplasmic	1	9	0.92
Transmembrane Helix	10	32	0.91
Non-Cytoplasmic	33	41	0.87
Transmembrane Helix	42	63	0.94
Cytoplasmic	64	69	0.78
Transmembrane Helix	70	93	0.85
Non-Cytoplasmic	94	174	0.96
Transmembrane Helix	175	197	0.94
Cytoplasmic	198	208	0.88