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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG3194-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKYLSSQRD ALSAPALPVS RENREPPKFQ GVKQREPLVF FIMRLNLKAV LLVLTVAVVV  60
   61 ITLGVYMRCA AFSFSPDFVR PLDRSARQSS SGGEATALHD IECSINQEYT VHCKRDENAN 120
  121 EVYVPFSFLR NYFDVSGAVS TNSNEVAKFN WVHSTAKVNL PRGKYDARGV YMYFENYNVE 180
  181 VRDRVKCISA AEGVPVSTQW EKRGYFYPTQ IAQFALSHYS KNLTEPAPRV RVLEDGDGNQ 240
  241 MEWSTPKTSN MTRIWHHKFN TSVVQFETAP GYEGVISIAL NQTLDLLLSV DLLLVTNSSS 300
  301 LMITVQNRDT RHNYSLHYIP ADLLLSVQDT NIYYGLGGSA LNKWRHITRD LHIDLQKGIM 360
  361 GDKRSPLKIR RSDLEVISIG FLGLGFFDNI TLSTSDHLAH FYDAAEWFVH NQDPKTGGWT 420
  421 NPVRRSLNGF AELRPGWISA MGQGHAISVL ARAYWHSGGD ERYLRAAAAG LQPYRVYSRD 480
  481 GGVLAQFMDK FYWYEEYPTT PPSYVLNGFI YSLLGLYDLN STAPGKIARE AGKLFAQGMH 540
  541 SLKKMLLLFD TGSGTSYDLR HLSLGVAPNL ARWDYHATHV NQLLLLATID SDPLIAQTAE 600
  601 RWKGYMFGRR AKHN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle