YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0307247, CG7...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	37	0.98
Transmembrane Helix	38	61	0.87
Non-Cytoplasmic	62	91	0.96
Transmembrane Helix	92	113	0.94
Cytoplasmic	114	122	0.80
Transmembrane Helix	123	142	0.96
Non-Cytoplasmic	143	150	0.84
Transmembrane Helix	151	172	0.92
Cytoplasmic	173	183	0.88
Transmembrane Helix	184	205	0.89
Non-Cytoplasmic	206	214	0.77
Transmembrane Helix	215	236	0.89
Cytoplasmic	237	300	0.98
Transmembrane Helix	301	323	0.90
Non-Cytoplasmic	324	340	0.90
Transmembrane Helix	341	361	0.92
Cytoplasmic	362	368	0.92
Transmembrane Helix	369	391	0.91
Non-Cytoplasmic	392	395	0.85
Transmembrane Helix	396	417	0.86
Cytoplasmic	418	434	0.74
Transmembrane Helix	435	455	0.92
Non-Cytoplasmic	456	460	0.83
Transmembrane Helix	461	481	0.92
Cytoplasmic	482	516	0.95

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKPKVGESL QEQSLTFSEA PLMAHENGKQ EERPQWSWSL NWAAIGSSLG AAVPVGYCTG  60
   61 VMNSPAELMR SWCNETLIAS YDLNLSDAGL EILWSAIVSI FLVGGAIGSV VGATMANRFG 120
  121 RRGCFFICGL LLGLGAISFY ACRPLRSVEL LLLGRMMVGL AGGLLTSFMS MWHSEISALS 180
  181 QRSTLAPLCP MGLTLGVVIA QVCSLRSVLG GPENWHFGLA FYGLLVLVCY APFRWYPESP 240
  241 KWLFIVQGRK EDARRQLQLL RGYTAGSAAL KAEMEEMEQE SACEVKTSSL MQVLRDPQLR 300
  301 LPLIIVCAFL GGQQLSGINA IFYYSVSIFR KAGLSSQASE WANLGAGSLN LFASMLGPVL 360
  361 LERVNRRPLM LFSTFFCAVF LLLFAIMLFF IESYSWFGMG CIGCIFLYIF FFQFGLGPMP 420
  421 FFIGAELFEL ATRPAAMSLG SLAYWLCNFI IGMAFPTMQN LWGALVFLPF SVTCLLIFGL 480
  481 TKRYLPETRG RHPSEVAPLV ALGFKSKVML PKQMSI