YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG1298-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGASNRILQV ALCASVFSLI CFVIAFSTPY WLVTDGRLQN PRFTNLGLWE VCFNNFQDIH  60
   61 RFFDNSFNGC LWVFEEEYYI IHDFLLPGFY ISVQLFATLC FVMCLVVIPL TVAFLRTSRD 120
  121 DDRYMVLLLA IGSCQVVGSV FGFIAVVIFG AKGDSRDWMP GWQNNDMGWS FALGVVGAVL 180
  181 LLPSGVLYLV EARRERYKRL NEISNREISE YGDEYYQNQG PSAVLPTAPS PYQSYFASEP 240
  241 SRPRRPQQSS ASNSAVQGGI QTDI

Type	Start	End	Confidence
Cytoplasmic	1	7	0.94
Transmembrane Helix	8	31	0.87
Non-Cytoplasmic	32	92	0.96
Transmembrane Helix	93	115	0.92
Cytoplasmic	116	125	0.88
Transmembrane Helix	126	149	0.94
Non-Cytoplasmic	150	167	0.94
Transmembrane Helix	168	190	0.94
Cytoplasmic	191	264	0.99