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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23240180, gi|...
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAMDLNGFY QTFISFLIWG AFSNFPEVFA VRVANSQQNQ PKKENQPDLT PMGSFWQQHV  60
   61 ATPSSSTPFD SPFFSATHGL VQTHPSIGGS HSGPAPLNGN SLGSGAPSSI LAGTKPALTA 120
  121 GSGYLNSRGS LPTSARYPAN KITGTVVEPN PKSPFRHLDF STSATAELRR NPALSAPDEC 180
  181 ARACREGEPP RICYYHFTLE YYTVLGAACQ VCTPNATNTV WSHCQCVLAD GVERGILTAN 240
  241 RMIPGPSIQV CENDKVVIDV ENHMEGMEVT IHWHGIWQRG SQYYDGVPFV TQCPIQQGNT 300
  301 FRYQWTGNAG THFWHAHTGL QKLDGLYGSV VVRQPPSRDP NSHLYDFDLT THIMLISDWL 360
  361 HEDAAERYPG RLAVNTGQDP ESMLINGKGQ FRDPNTGFMT NTPLEIFTIT PGRRYRFRMI 420
  421 NAFASVCPAQ VTIEGHGMTV IATDGEPVHP VDVNTIISFS GERYDFVISA DQPVGAYWIQ 480
  481 LRGLGECGIR RAQQLAILRY ARGPYQPASS PPTYDVGIPQ GVVMNPLDAQ CNRQRNDAIC 540
  541 VSQLKNALEI DRGILAEKPD VKIFLPFRFF VYRAEDLFQP NTYNRFLVAP TGDHVISLID 600
  601 EISYLSAPAP LTSQYNDINP DQFCNGDNRP ADCGPNCMCT HKIDIPLNAI VEVVLVDEVV 660
  661 PSGDHLTSLV DEISYISPPA PPLSQIDDIP PEYFCNGDNR PPNCGPNCEC THMVDIPLGA 720
  721 IVEVVLVDEV QQVNLSHPFH LHGTAFYVVG LGRSPDKSIK KINLKHALEL DQMGMLERHF 780
  781 SKPPLKDTIA VPNNGYVVIR FRADNPGYWL FHCHFLFHIV IGMNLIFHIG TTADLPPVPP 840
  841 RFPTCGDHVP PVTWY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle