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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG42345-PA
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAMDLNGFY QTFISFLIWG AFSNFPEVFA VRVANSQQNQ PKKENQPDLT PMGSFWQQHV  60
   61 ATPSSSTPFD SPFFSATHGL VQTHPSIGGS HSGPAPLNGN SLGSGAPSSI LAGTKPALTA 120
  121 GSGYLNSRGS LPTSARYPAN KITGTVVEPN PKSPFRHLDF STSATAELRR NPALSAPDEC 180
  181 ARACREGEPP RICYYHFTLE YYTVLGAACQ VCTPNATNTV WSHCQCVLAD GVERGILTAN 240
  241 RMIPGPSIQV CENDKVVIDV ENHMEGMEVT IHWHGIWQRG SQYYDGVPFV TQCPIQQGNT 300
  301 FRYQWTGNAG THFWHAHTGL QKLDGLYGSV VVRQPPSRDP NSHLYDFDLT THIMLISDWL 360
  361 HEDAAERYPG RLAVNTGQDP ESMLINGKGQ FRDPNTGFMT NTPLEIFTIT PGRRYRFRMI 420
  421 NAFASVCPAQ VTIEGHGMTV IATDGEPVHP VDVNTIISFS GERYDFVISA DQPVGAYWIQ 480
  481 LRGLGECGIR RAQQLAILRY ARGPYQPASS PPTYDVGIPQ GVVMNPLDAQ CNRQRNDAIC 540
  541 VSQLKNALEI DRGILAEKPD VKIFLPFRFF VYRAEDLFQP NTYNRFLVAP TGDHVISLID 600
  601 EISYLSAPAP LTSQYNDINP DQFCNGDNRP ADCGPNCMCT HKIDIPLNAI VEVVLVDEVQ 660
  661 QPNLSHPFHL HGYGFSVIGI GRSPDSSVKK INLKHALDLD RRGLLHRQYN LPPTKDTIAV 720
  721 PNNGYVVLRF RADNPGFWLF HCHFLFHIVI GMNLILQVGT NADLPPVPPG FPTCGDHTPS 780
  781 IPIN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle