YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG10396-PA
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFPCMKLR KLFQMTRRRF ASGGDGIRLM VADRQVVGHG INGRPIYFDS PDCPFPAIRY  60
   61 REVSPELCAL REKELDDWKK LSLDEKKQLY RYSFCQTYAE FQHITPEWKM CLGVALWLVS 120
  121 IGIAISITMK TVLYGKLPDT FNDERQSAQL RRIIQLQMNP ITGLASKWCY RENKWK

Type	Start	End	Confidence
Cytoplasmic	1	110	0.73
Transmembrane Helix	111	132	0.76
Non-Cytoplasmic	133	176	0.82