YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG9249-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRNALLVSG KLRHLLSCSI GRNSTRSSST AKSLDAGTQK EVRHHENHAS EWWNQNGTMG  60
   61 ALHALNEIRV PFIRDGIVSR GTVKPGYVNT TKVLLGQNIL EVGCGGGLLT EHLARLGAQV 120
  121 AGIDLGEKLI EAAREHLKCS SPELASNVVY KIEPVDQHAK ANCECYDAVI VSEVLEHVKD 180
  181 KVSLLEASVR SLKPGGSIFI TTLNKTIPSW FGGVLLSEYV LNLVPRGTHH WDKMISPLDV 240
  241 QRILDTSKFI SGFIFRLGYS LFSRSSAVNC QTVLVNGSTY DFWSNTWRWI NNNQMCYALQ 300
  301 AVKQAQREYN

Type	Start	End	Confidence
Signal Peptide	1	27	0.52
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	310	0.98