YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0307147, CG9...
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLKGIRVLE FVGLAPGPFC GKILTDFGAT VTRIDKVMEN PLDVLQQGKR TLCLDLKNPK  60
   61 GQQAVQRLVK KCDVLIEPFR PGVMEKLNLG PTDLCTANPR LIYARLTGFG QHGRLAQRAG 120
  121 HDINYAALSG VLSMLGRRHE KVTAPINILA DFAGGSLMCA LGICLALLER HRSGKGQVVD 180
  181 ASMVEGAAYV ASWLFMSRNL VIWGRERGDN LVDGGSFFYD TYETKDGRYM SVGALEPQFF 240
  241 EMLKQRLELP EDVSQFGEEH QVRGRKLLTE AFLSKTQAEW SQIFEDVDAC VYPVLDYREV 300
  301 HRHDHNIQRN SFEVTEDTAT PRPAPVLSRT PGKLPKATDG AQVEWMDELD LKPDEFKDLL 360
  361 DSGVLSLPER AKL

Type	Start	End	Confidence
Cytoplasmic	1	145	0.64
Transmembrane Helix	146	168	0.70
Non-Cytoplasmic	169	373	0.58