YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG9317-PA, FBpp0...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	51	0.91
Transmembrane Helix	52	73	0.81
Non-Cytoplasmic	74	175	0.89
Transmembrane Helix	176	198	0.83
Cytoplasmic	199	206	0.87
Transmembrane Helix	207	226	0.94
Non-Cytoplasmic	227	232	0.81
Transmembrane Helix	233	255	0.87
Cytoplasmic	256	264	0.80
Transmembrane Helix	265	286	0.92
Non-Cytoplasmic	287	293	0.81
Transmembrane Helix	294	312	0.88
Cytoplasmic	313	385	0.94
Transmembrane Helix	386	406	0.88
Non-Cytoplasmic	407	413	0.79
Transmembrane Helix	414	435	0.85
Cytoplasmic	436	441	0.88
Transmembrane Helix	442	462	0.93
Non-Cytoplasmic	463	469	0.83
Transmembrane Helix	470	491	0.92
Cytoplasmic	492	500	0.79
Transmembrane Helix	501	523	0.91
Non-Cytoplasmic	524	530	0.74
Transmembrane Helix	531	550	0.93
Cytoplasmic	551	674	0.92

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDIEDNDGD EYDELSELRQ RHKPESQPSV DEAFDLDDLL PTIGEFGKYQ KLLVFGICLP  60
   61 ACIPCGFCAF NQLFMADTPD DYWCRIPELL DLPLEQRKSL SIPKELDNDE LVYSKCYTYG 120
  121 VNWTQLLESG EEDDLTTMEP NASWPLIKCP QGWEYNTSVV WSSIVIDFDL VCDQDIYPTI 180
  181 GLAALNTGGP VGVYLFGLLN DRGGRRLSYF VCLATLLAGS LMTSLSKDFW TWAGSRVIVG 240
  241 LTIPAVYQIP FIISLELVGE NYRSFVTVMT CTFYTSGIML LSGVTYLERD WVRLSYITSL 300
  301 PFYAYFLYMF VMPESPRWLL MRGRLEEALK ILERMAKVNG REFPEAVHLK LEAQIRRDKL 360
  361 KKQKKKMANV GLADLCRTPN MRLKTILITL SWFANETVYL GLSYYGPALG TNQYVSFFLS 420
  421 AVVELPSYLC CWYFMDTWGR RWPLSLSMIL GGVACVITVM LPDDAVDETL VLYLVSKALL 480
  481 SASFLIIYPF AGELYPTQVR GIGIGASSYI GGLGLIGIPF ITYLGKDNLK LPLVIMGFLS 540
  541 MLGGMTGLRL PETLHHRLPQ TIEEGEEFGK NWQFKDCCRC AQKPEILSQP ASYENLDVLA 600
  601 GSSTNASEVE LELRDSRRVR EPAPRIDERT PLDTTASGSG RPVHRPSMKR LVRQMSVMDT 660
  661 QRTHDGTMQL THWI