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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG2478-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAAVGLMLS HGAGGMEPAL SRPDYEQSAL HHSCLLVLLR GVGPSRARVL QRAFEKVRRV  60
   61 NHIRVNDSSG HPRSIWIRFV HDHPVEHNDW GDFQTHRRLL GLVTIGKFDS QIELNELCRQ 120
  121 HESLKVRYGS TLYESRAIFF GPDEQPLETI GEVLGPPAAG GRRLQDEFTT PSNFKAQAFF 180
  181 YREQDSCADL ESRIGDFASA LFWVLESRRL ERSREKADKV SLLLAPFEKR DFVGLDMESR 240
  241 NNRKRCVGRV MKNLADLSLQ AGLVDDALSL YHNANETLRS VGDSLWVGAT EEGLCAASAM 300
  301 LLYPQMRETE TLHRNSSLQE AGTSPLKNTP EKWRASDATK KISASDATAN NVDSNQPQQR 360
  361 VTSNSSSCSS VSSLVTTATN SSASDTPTTS SSSTSTISAA PIPGHQRNGD LPGNILKAEE 420
  421 ISNYYRKAII NYSKYRHAAT IETEAALKAS RICIEQNRPL DVAMFLQNIL YINLSMSEAE 480
  481 RVKRFEVITD LYQQIGYQRK AAFFQRLAAL KHVQQGSQAP DWNQSYRLML GSFTGYRLCL 540
  541 DPLEVIENAA GWPALQIDLV QTLITAARRL GHSALATRHM TFLLQTQWDN MSPTEQSEMA 600
  601 VQLQNLSAQC EGSPVPLVLE NGTVIPPANL TDLPYCIDLQ VKDLPAHLRP QRIKVAKADS 660
  661 GPFLFTPIHF NSVDRRDKKK DKNKIAFQWV QNDLSEVTVR LRNPLPFELP VTDMRLLTNG 720
  721 VVFESLPQTL VLQPHVPTYV ALHGTPIETG QLDLQGYSTH TLGVKSNCRL KHMRGRSFPP 780
  781 NYVVDVIPAL PRISVKTSLP QTATFSNMNS ADIVVTSASL TLYNGESSSC TITITNESAT 840
  841 LPLEHLEFSI NSNVEQELQQ KIFRIDEEAI KAHLPVPPQG TIEIIVDVFA EADFVCPQPP 900
  901 ASLHSAAAPG DYGASSLTHY SSVSTSGHAS LPSRVGSPHH RRNEPQNSSF RSTISGGPPS 960
  961 LAALTLHPGG GGGVGPSSLG SQYNQHIEAQ VRFKYSGGDA LTAGYCRQCA VSFNLELLPS1020
 1021 VQITSWDVLP AEVASQFYLV LDISNLTAQE MSLNYTDTKN ILIEAKESCR VPIPVDRCSL1080
 1081 EKVVAARAAE VAENLERELC FRTQLLSFND ALSKLCSIHI AERVKIKWLL TGTDIQGIAS1140
 1141 LRGIVLSQSM VDLTAVSPLE WAISFQDTLV QPHNEIVCTV GQRSLLSIQL ANQSLQPLRN1200
 1201 LVLSIKFYQD YLNGMENYNL ETRVAISGPN RIAIPLLEKQ EQKEHTCSVI FFTPGRFKAS1260
 1261 IECTSNPQKQ SEQPSSLLTR SCPAEAESVG QSVMFSSSYD EQQAHVWKFI PPIEVTVVEQ1320
 1321 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle