YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG17597-PA, FBpp...
Protein type:	Transmembrane
Type Confidence:	0.58
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKTRVYVIG VGMTKFEKPG RRADACYPDF AKEAITKALQ DAGIKFEEVQ QAVAGYVYGD  60
   61 STCGQRAIYE VGMTGIPVYN VNNNCSTGSS ALYLAKQIVE SGNSECVLAL GFEKMERGSL 120
  121 SAKYFDRANP MERHITEMSE LTEIGAGPMA AQIFGNAGKE HMKKYGTKPE HFGKIAWKNH 180
  181 KHSVNNPYSQ FRDEYTLEQI MKSPQVVEGV LTKLQCCPTS DGSGAAILAS EAFVRRHGLE 240
  241 KQAVEIVGME MASDPASTFA DKSLMKIAGT DMTRLATERL FAKSGYKPQD VQVVELHDCF 300
  301 SANELITYEA LGLCGEGKAG EFIDAGDNTY GGKFVVNPSG GLISKGHPLG ATGLAQCAEL 360
  361 CWQLRGLAEK RQVPNAQLAL QHNLGLGGAV VVALYRLGFP GAAKAKL

Type	Start	End	Confidence
Non-Cytoplasmic	1	378	0.97
Transmembrane Helix	379	399	0.54
Cytoplasmic	400	407	0.51