YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0311768, CG1...
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFIWQLISA AIYLVGLLTI GVFLYDNLKS LVSIIKAVLE PYFQPHLPRT LVDKFGQWAV  60
   61 VTGATDGIGK EYARELARQG INLVLISRTK EKLIAVTNEI ESQYKVKTKW IAADFAKGRE 120
  121 VYDQIEKELA GIDVGILVNN VGMMYEHPES LDLVSEDLLW NLLTVNMGSV TMLTRKILPQ 180
  181 MIGRRKGAIV NLGSSSELQP LPNMTVYAAS KKFVTYFSKA LELEVAEHNI HVQLVMPNFV 240
  241 VTKMNAYTDR VMQGGLFFPN AYTFARSAVF TLGKTSETNG FWTHGIQYAI MKLAPLPIRT 300
  301 YLGHQLFKRL RIEALEQKQK KLKLT

Type	Start	End	Confidence
Cytoplasmic	1	6	0.40
Transmembrane Helix	7	25	0.73
Non-Cytoplasmic	26	325	0.70