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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: trpgamma-PA, trp...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMEEENTIRP HQEIRQLTLE EKKFLLAVER GDMAGTRRML QKAQDTEYIN VNCVDPLGRT  60
   61 ALLMAIDNEN LEMVELLINY NVDTKDALLH SISEEFVEAV EVLLDHENVT FHSEGNHSWE 120
  121 SASEDTSTFT PDITPLILAA HRDNYEIIKI LLDRGAVLPM PHDVRCGCDE CVQSRQEDSL 180
  181 RHSRSRINAY RALASPSLIA LSSKDPILTA FELSWELRRL SFLEHEFKNE YQELRKQCQD 240
  241 FATALLDHTR TSHELEILLN HDPTGPVYEH GERMHLNRLK LAIKLRQKKF VAHSNVQQLL 300
  301 ASIWYEGLPG FRRKNMALQA VDIIRIGIMF PIFSLAYILA PYSSIGQTMR KPFIKFICHS 360
  361 ASYFTFLFLL MLASQRIETF IGGWFFADSS GMLNTMEELP TKRGAKPTFI EWLILAWVSG 420
  421 LIWSEVKQLW DVGLQEYLND MWNVIDFVTN SLYVATVALR VVSFFQVQKE MIYNSHATDL 480
  481 PRERWDAWDP MLISEGLFSA ANIFSSLKLV YIFSVNPHLG PLQVSLSRMV MDIMKFFFLY 540
  541 VLVLFAFGSG LNQLLWYYAD LEKKRCPEVS PMSALLNMNG TNDPNACIVW RRFSNLFETT 600
  601 QTLFWAVFGL IDLDSFELDG IKIFTRFWGM LMFGTYSVIN IVVLLNLLIA MMNHSYQLIS 660
  661 ERADVEWKFA RSKLWISYFE EGGTCPPPFN IIPTPKSIWY AIKWMRRVFC SGSSAARREH 720
  721 LKTIRRKAQQ ASDRDFKYQQ IMRNLVRRYV TVEQRKAESQ GVTEDDVNEI KQDISAFRCE 780
  781 LVEILKNSGM DTNVTAGQGG GGGGKKNRQK ERRLMKGFNI APPGSTGSLA PVAEFSTSLD 840
  841 NYDNQHEILS STLSTLFTPN FMHKRQQSQA GSGGGGSESP TTPTAPQGTQ GAAMTASSQV 900
  901 TKYNKSALKP YNKRIAGHKK RWGTLIEAAK VGNVSKMLGR SKSEDSVCNS SHTSTPVHGQ 960
  961 MRVTYAQNSP QQEYGYHGET SSTTISTPTP TISVVSNSPA AHAGVGSHFF HTTSGLTAIA1020
 1021 ALKRKRKKFS SSKNICPVTE SVAAANAAEI LNDKTLKRVS SYPAAEAGVQ HNPAQLVKPR1080
 1081 RHEQTQSQHD SVETNSTFTL SIDPSNTSVN SREPLISTSC VSTTGAIG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle