YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0308005, cni...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFNFTAFTY IVALIGDAFL IFFAIFHVIA FDELKTDYKN PIDQCNSLNP LVLPEYLLHI  60
   61 FLNLLFLFCG EWFSLCINIP LIAYHIWRYK NRPVMSGPGL YDPTTVLKTD TLYRNMREGW 120
  121 IKLAVYLISF FYYIYGMVYS LIST

Type	Start	End	Confidence
Cytoplasmic	1	6	0.95
Transmembrane Helix	7	30	0.91
Non-Cytoplasmic	31	59	0.93
Transmembrane Helix	60	82	0.89
Cytoplasmic	83	122	0.89
Transmembrane Helix	123	142	0.90
Non-Cytoplasmic	143	144	0.84