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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Syx5-PB, Syx5-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTRRRLHQT DQQDYSSSST YTIQEDQQGG AGAGSVGTGT AGGSVGLLAQ SLVPPPTGHE  60
   61 AAIHIGDNYQ SGDSISTPDY SDDKYGKAAR QWNLRAFSGH ALRTLSAAAA VVTGNQPGIN 120
  121 NDSQSNYSYP ASIPTSSQFY QSKEEPQETE PEPEIFVMAA RDRTGEFANA IRSLQARNIT 180
  181 RAVNIRDPRK AKQVQSYSEF MMVARFIGKN IASTYAKLEK LTMLAKKKSL FDDRPQEIQE 240
  241 LTYIIKGDLN ALNQQIARLQ DISKDQRRHT NGKHLVSHSS NMVLALQSKL ASMSTDFKQI 300
  301 LEVRTENLKQ QKTRRDQFSQ GPGPLAAHTV SPSTAKQGSL LLSEENQAVS IDMGSSDTTP 360
  361 LLSTQTQMAI YDDSDNYVQQ RAETMQNIES TIVELGGIFQ QLAHMVKEQE EIVERIDTNV 420
  421 ADAELNIEAA HGEILKYFQS VSKNRWLMIK IFGVLIFFFL FFVVFMS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle