YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ZnT35C-PB
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLANWQTARK SSEMNDARLY RNAATSLDKS RLEMLHEYVR DHCHRARSEG VDVKARRKLI  60
   61 IASILCLVFM IAEIVGGVLS NSLAIATDAA HLLTDFASFM ISLFAIWIAG RPSTQRMSFG 120
  121 WYRAEVIGAM ASVFMIWVIT GILVWLAIGR LISGDYEVNA KIMLITSGLA ILVNVIMGVQ 180
  181 LQHGHSHGLG GGHGHSHGGS KNASHVQATS TPCSDSPSQR IEGGVAYAPE DAELPGGGLP 240
  241 TFSYQNTKLV DPTLDLEIAA VLAETAPGSH HHGGPVGREA VNMNVRAALI HVIGDVIQSV 300
  301 GVFVAAGVIY FWPEYSIVDP ICTFVFSIIV LFTTFTIMKD ALLVLMEGTP NYMHYAEVLQ 360
  361 IFQGIEGVER VHNLRIWALS INKVALSAHL AIAENANPKR ILDAATSAVH LRYNFFETTI 420
  421 QIEDYTAQME SCLQCNVPEK

Type	Start	End	Confidence
Cytoplasmic	1	58	0.99
Transmembrane Helix	59	80	0.88
Non-Cytoplasmic	81	88	0.69
Transmembrane Helix	89	110	0.89
Cytoplasmic	111	125	0.88
Transmembrane Helix	126	149	0.88
Non-Cytoplasmic	150	159	0.85
Transmembrane Helix	160	181	0.89
Cytoplasmic	182	287	0.99
Transmembrane Helix	288	310	0.92
Non-Cytoplasmic	311	316	0.79
Transmembrane Helix	317	338	0.90
Cytoplasmic	339	440	0.97