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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GABA-B-R1-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSDGAVTFW IFLLCLIASP HLQGGVAGRP DELHIGGIFP IAGKGGWQGG QACMPAARLA  60
   61 LDDVNKQPNL LPGFKLILHS NDSECEPGLG ASVMYNLLYN KPQKLMLLAG CSTVCTTVAE 120
  121 AAKMWNLIVL CYGASSPALS DRKRFPTLFR THPSATVHNP TRIKLMKKFG WSRVAILQQA 180
  181 EEVFISTVED LENRCMEAGV EIVTRQSFLS DPTDAVRNLR RQDARIIVGL FYVVAARRVL 240
  241 CEMYKQQLYG RAHVWFFIGW YEDNWYEVNL KAEGITCTVE QMRIAAEGHL TTEALMWNQN 300
  301 NQTTISGMTA EEFRHRLNQA LIEEGYDINH DRYPEGYQEA PLAYDAVWSV ALAFNKTMER 360
  361 LTTGKKSLRD FTYTDKEIAD EIYAAMNSTQ FLGVSGVVAF SSQGDRIALT QIEQMIDGKY 420
  421 EKLGYYDTQL DNLSWLNTEQ WIGGKVPQDR TIVTHVLRTV SLPLFVCMCT ISSCGIFVAF 480
  481 ALIIFNIWNK HRRVIQSSHP VCNTIMLFGV IICLISVILL GIDGRFVSPE EYPKICQARA 540
  541 WLLSTGFTLA YGAMFSKVWR VHRFTTKAKT DPKKKVEPWK LYTMVSGLLS IDLVILLSWQ 600
  601 IFDPLQRYLE TFPLEDPVST TDDIKIRPEL EHCESQRNSM WLGLVYGFKG LILVFGLFLA 660
  661 YETRSIKVKQ INDSRYVGMS IYNVVVLCLI TAPVGMVIAS QQDASFAFVA LAVIFCCFLS 720
  721 MLLIFVPKVI EVIRHPKDKA ESKYNPDSAI SKEDEERYQK LVTENEELQR LITQKEEKIR 780
  781 VLRQRLVERG DAKGTELNGA TGVASAAVAT TSQPASLINS SAHATPAATL AITQGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle