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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Pgant35A-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMQIKRLLCK SCGLGTLLVA VVWLLALLFY SHSLRSSIRS AGWRIDEGNA TPRAELSYQA  60
   61 RVTVGCTPNA SITTGESPAA PKPPSDPEQL ELLGVVRNKQ DKYIRDIGYK HHAFNALVSN 120
  121 NIGLFRAIPD TRHKVCDRQE TTEAENLPQA SIVMCFYNEH KMTLMRSIKT VLERTPSYLL 180
  181 REIILVDDHS DLPELEFHLH GDLRARLKYD NLRYIKNEQR EGLIRSRVIG AREAVGDVLV 240
  241 FLDSHIEVNQ QWLEPLLRLI KSENATLAVP VIDLINADTF EYTPSPLVRG GFNWGLHFRW 300
  301 ENLPEGTLKV PEDFRGPFRS PTMAGGLFAV NRKYFQHLGE YDMAMDIWGG ENIEISFRAW 360
  361 QCGGAIKIVP CSRVGHIFRK RRPYTSPDGA NTMLKNSLRL AHVWMDQYKD YYLKHEKVPK 420
  421 TYDYGDISDR LKLRERLQCR DFAWYLKNVY PELHVPGEES KKSAAAPIFQ PWHSRKRNYV 480
  481 DTFQLRLTGT ELCAAVVAPK VKGFWKKGSS LQLQTCRRTP NQLWYETEKA EIVLDKLLCL 540
  541 EASGDAQVTV NKCHEMLGDQ QWRHTRNANS PVYNMAKGTC LRAAAPTTGA LISLDLCSKS 600
  601 NGAGGSWDIV QLKKPTEAEG RAKEARNSDK AL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle